rfmm_100834.1

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Basic information about the TSS


TSS ID:rfmm_100834.1
Species:mouse
Chr:chr10
Start:127124303
End:127124329
Strand:-
Source datasetsFANTOM5|DRA000914
ProtocolCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2346723,EM10E0966520)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF198285:0
MA433862:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF225116:41
  • MA460693:41
  • BC059015:-311
  • ENSMUST00000156208.2:-393
  • NM_001379571.1:-421
  • NM_001379570.1:-421
  • ENSMUST00000026476.13:-430
  • AK158797:-435
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:208
Nearest PromoterID:XM_011243269.4
Entrez ID:Mbd6
Nearest Unigene:XM_011243267
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.038462
GC%:0.740741
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):