rfmm_13753.1

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Basic information about the TSS


TSS ID:rfmm_13753.1
Species:mouse
Chr:chr2
Start:32511542
End:32511565
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2632711,EM10E1086566)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF193259:191
MA428836:191
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • DQ486026:192
  • ENSMUST00000113278.9:205
  • NM_001198790.1:205
  • AK046613:205
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-217
Nearest PromoterID:NM_001198790.1
Entrez ID:Ak1
Nearest Unigene:NM_001198792
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.458333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):