rfmm_139294.1

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Basic information about the TSS


TSS ID:rfmm_139294.1
Species:mouse
Chr:chr15
Start:89337902
End:89337964
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2513051,EM10E1035730)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_021921.3:150
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000023291.6:152
  • AK158968:298
  • AF310135:369
  • BC029704:371
  • AF220195:435
  • AK014339:447
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-181
Nearest PromoterID:NM_021921.3
Entrez ID:Mapk8ip2
Nearest Unigene:NM_021921
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.064516
GC%:0.650794
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):