rfmm_143857.1

From referenceTSS
Revision as of 04:46, 19 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_143857.1
Species:mouse
Chr:chr16
Start:33607537
End:33607546
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2530278,EM10E1043486)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000148293.2:55
AK153575:55
GeneID:100415902
HGNC/MGI_ID:MGI:3783100 MGI:3783101
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene 15657; predicted gene 15658
    Gene_symbol:Gm15657 Gm15658
    Gene_synonyms:
    Gene_source:MGI:3783100 MGI:3783101



    TATA-Box annotation


    Distance to TSS:227
    Nearest PromoterID:XR_384829.4
    Entrez ID:Gm15658
    Nearest Unigene:XR_384829
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene 15657; predicted gene 15658
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.