rfmm_19011.1

Basic information about the TSS

TSS ID:	rfmm_19011.1
Species:	mouse
Chr:	chr2

Start:	121786446
End:	121786463
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2657231,EM10E1096024)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF193538:18 MA429115:18
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000036647.13:19 NM_001290992.1:19 NM_001290991.1:19 NM_212450.4:19 AK163262:19 AK082646:164 LF193539:164 MA429116:164 ENSMUST00000110578.8:429 AK033382:471 ENSMUST00000138920.8:478 AK169248:478 AK044805:491 AK053513:491 ENSMUST00000140570.8:498 BC066219:498 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-28
Nearest PromoterID:	NM_001290992.1
Entrez ID:	Ctdspl2
Nearest Unigene:	NM_001290991
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.176471
GC%:	0.611111
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "ENSMUST00000036647.13:19 NM_001290992.1:19 NM_001290991.1:19 NM_212450.4:19 AK163262:19 AK082646:164 LF193539:164 MA429116:164 ENSMUST00000110578.8:429 AK033382:471 ENSMUST00000138920.8:478 AK169248:478 AK044805:491 AK053513:491 ENSMUST00000140570.8:498 BC066219:498" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.