rfmm_66138.1

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Basic information about the TSS


TSS ID:rfmm_66138.1
Species:mouse
Chr:chr7
Start:30021835
End:30021843
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2861790,EM10E1181351)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001033140.3:35
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC147174:38
  • BC147173:38
  • AK002462:51
  • AK155437:72
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-39
Nearest PromoterID:NM_001033140.3
Entrez ID:Sdhaf1
Nearest Unigene:NM_001033140
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):