FastQCFastQC Report
Thu 5 Sep 2024
mutA_rep2.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenamemutA_rep2.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37834538
Sequences flagged as poor quality0
Sequence length35-76
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTAT2522890.6668219392556082No Hit
AACACGGACCAAGGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAATGAAGGTGA2171800.5740257750735585No Hit
GCTTCTTTTCCGACAAAACACCAAATGGCGGATGACGCCGGTGCAGCGGG2130190.5630278873763438No Hit
GCCGAAACGATCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCG2033210.5373952233802881No Hit
GAATCCGACTGTTTAATTAAAACAAAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTGATTTCTGCCC1582340.4182263306611541No Hit
GTTTTAGGGAGGGAGAGCGGCCTGGGTCCTGGGTGTTGTGTGCGGAGCTGTGGCGTCGCGTGTGAGGCGCGTGC1444150.381701502473745No Hit
GAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTC1409280.3724850558502921No Hit
GGTTTTTCTCCCCGCCGCTGCGCTGGTAAGCCTGTGTTTTGGTTCGCTATGGCCCGTACTAAGCAGACTGCTCGC1281990.33884119319760164No Hit
GAGATTTTTGCGGCTATTTTCGTTGGTGTGTTGGTCATGTCTGGTCGCGGCAAAGGCGGAAAGGGACTGGGTAA1249830.33034102332635856No Hit
GGACTTTCCCGATCGCCAGGCAGGAGTTTCTCTCGGTGACTACTATCGCT1224280.3235879343894724No Hit
GTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1222680.32316504036602745No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAACTAACCAGG1192470.31518027258585796No Hit
GTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGGG1190940.3147758801759387No Hit
GAGAAGCTGTCTATCGGGCTCCAGCGGTCATGTCCGGCAGAGGAAAGGGC1171290.3095822129505057No Hit
GGTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGG1131720.29912351513318336No Hit
GCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATAT1083710.286434051342189No Hit
GTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTT1065520.28162627491314945No Hit
GAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGA999620.26420832732251154No Hit
GAGTAGGAGGGCCGCTGCGGTGAGCCTTGAAGCCTAGGGCGCGGGCCCGG975770.25790456328553557No Hit
GGAAGTGAATCTAGCTCTGAAGGCATGGCGCGTACGAAGCAGACTGCTCG908130.24002671844440124No Hit
GCGCATGAATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCCAGC888270.2347775463783911No Hit
GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATC849410.22450650778397244No Hit
GGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATGAGAGGTGTAGA821740.2171930842660217No Hit
GCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGC812460.21474029893004112No Hit
GACTGCGATAGGAATCATGTCTGGTCGCGGCAAAGGCGGAAAAGGCTTGG807020.21330245925032837No Hit
GGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCA790040.2088144964265191No Hit
GGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATA788560.2084233194548325No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT755610.19971434565951351No Hit
GCTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCAAGTGGAGGAAGAAGCGAATGCGC752940.1990086412578898No Hit
GACAAAGCGTTGGGTGAGACTCCTCTTGCTCGTCATGTCTGGCCGCGGCA747620.19760251862993541No Hit
GGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGAC730780.19315155903317757No Hit
GATTAGATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAACACTACG714660.18889090174696993No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN701290.18535709356355826No Hit
GGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATC672400.17772121335273078No Hit
GAGACGCGGAGCTGGGAAAAGGGAGGCAGAGGAGGCGGAGGCAGAGGCAGAGGCAGAGCCCGGTGCCGAGACCA658160.17395745654407094No Hit
GCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACT628070.16600440581565976No Hit
GCTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGGTGCG618840.16356483591791182No Hit
GCTTTTTCGTCTGGGCTGCCAACATGCCATCCAGACTGAGGAAGACCCGG611760.16169352986416802No Hit
GAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACA606890.16040634618030752No Hit
GAGTCTTTCTTGACCGTATAGATAATAGGCCTTTTGCCATGTCTGGGCGT588770.15561707136479372No Hit
GATCGGCGCTTTGCCACTTGTACCCGAGTTTTTGATTCTCAACATGTCCG578570.1529211219653323No Hit
GTGTAAATCTCGCGCCGGGCCGTACCCATATCCGCAGCAGGTCTCCAAGGTGAACAGCCTCTGGCATGTTGGAAC530110.14011271923024407No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATC524680.13867752263817784No Hit
GAATGAGACAGCATGGCCCGTACTAAGCAGACTGCCCGCAAGTCGACCGG515510.13625381126630912No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACCAGG512910.1355666084782111No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC511840.1352837981000323No Hit
GCTTTTCCAAGCGGCTGCCGAAGATGGCGGAGGTGCAGGTCCTGGTGCTT493890.1305394557745095No Hit
GCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCC491640.1299447610540401No Hit
GCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCA487300.12879766101544574No Hit
GCCTTTCGTTGCCTGATCGCCGCCATCATGGGTCGCATGCATGCTCCCGG467460.12355377512472862No Hit
GACATCTGACCTCATGGAGGCTTGGGAGTGTTTGGAAGATTTTTCTGCTG450960.1191926805079528No Hit
GGCCATTTGACCATTCACCACATTGGTGTGCACCTCCAAGCTTTGCAAAGATGGATAAAGTTTTAAACAGAGAGG443660.11726322652598534No Hit
GTTCAAGCTCAACACCCACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTGGACCAATCT440800.11650730345907753No Hit
GACAGACGTCTCTGCAGGCAAGCTTTTCTGTGGTTTTGCCATGGCTCGTA434200.1147628656123672No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA433710.11463335431768717No Hit
GCTCTCCGCCAGACCGCCGCCGCGCCGCCATCATGGACACCAGCCGTGTG431300.11399637019487326No Hit
GCTACGCCGCGACGAGTAGGAGGGCCGCTGCGGTGAGCCTTGAAGCCTAG421920.11151715398242737No Hit
GGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGCGCTCTCGC421480.11140085812598001No Hit
GAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATGAACG409960.10835602115717655No Hit
GCTTTTCGAGGTAGGAGTCGACTCCTGTGAGGTATGGTGCTGGGTGCAGA408760.10803885063959284No Hit
GCTCTTCCCTTTTGCGGCCATCACCGAAGCGGGAGCGGCCAAAATGAAGTTTAATCCCTTTGTGACTTCCGACCG406780.10751551928557974No Hit
GCTTTCCAACTTGGACGCTGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATC406130.10734371858855526No Hit
GCCTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGAAGCTAAG402170.10629705588052905No Hit
GCTTTCTCTCTCGCGCGCGGTGTGGTGGCAGCAGGCGCAGCCCAGCCTCG398210.10525039317250284No Hit
GGATTTTGTTTGTTTTCTCGTGAGCTTAGGCCGCTGGTTTTGGTGATTTT396290.10474292034436895No Hit
GCCTTTTTGCTGTAGGCCCGGGTGGTTGCTGCCGAAATGGGCAAGTTCAT395840.10462398140027507No Hit
GGTATTGCGTTACAGATTTAACAGCTGTGCTTTCAAGATGTCTGGCCGCGGTAAGGGCGGAAAGGGTCTAGGTA390540.10322314494761373No Hit
GCTCTTTTACCAAGGACCCGCCAACATGGGCCGCGTTCGCACCAAAACCGTGAAGAAGGCGGCCCGGGTCATCAT387230.10234828293661205No Hit
ATTTTTTCGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCTGTGTGTCTAATACATGCATGTCGAGCGAAGGT385720.10194917670198589No Hit
GCTCTACCGGCGGGATTTGATGGCGTGATGTCTCACAGAAAGTTCTCCGC379470.10029724692290415No Hit

[OK]Adapter Content

Adapter graph