FastQCFastQC Report
Thu 5 Sep 2024
mutA_rep3.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenamemutA_rep3.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31263476
Sequences flagged as poor quality0
Sequence length35-76
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTCTTTTCCGACAAAACACCAAATGGCGGATGACGCCGGTGCAGCGGG1855650.5935520413660976No Hit
GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTAT1841640.5890707738320589No Hit
GCCGAAACGATCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCG1662920.5319050255320298No Hit
AACACGGACCAAGGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAATGAAGGTGA1635220.5230448463248297No Hit
GAATCCGACTGTTTAATTAAAACAAAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTGATTTCTGCCC1213790.3882453761699435No Hit
GTTTTAGGGAGGGAGAGCGGCCTGGGTCCTGGGTGTTGTGTGCGGAGCTGTGGCGTCGCGTGTGAGGCGCGTGC1212460.3878199596231718No Hit
GAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTC1198910.38348582863914427No Hit
GAGATTTTTGCGGCTATTTTCGTTGGTGTGTTGGTCATGTCTGGTCGCGGCAAAGGCGGAAAGGGACTGGGTAA1138480.36415656403657737No Hit
GGTTTTTCTCCCCGCCGCTGCGCTGGTAAGCCTGTGTTTTGGTTCGCTATGGCCCGTACTAAGCAGACTGCTCGC1134870.3630018619810542No Hit
GGACTTTCCCGATCGCCAGGCAGGAGTTTCTCTCGGTGACTACTATCGCT1122540.35905796271662177No Hit
GTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1076800.34442747185245814No Hit
GAGAAGCTGTCTATCGGGCTCCAGCGGTCATGTCCGGCAGAGGAAAGGGC1029710.3293651672002179No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAACTAACCAGG1010580.3232462058921407No Hit
GTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGGG1006100.32181322383985705No Hit
GAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGA979080.31317055083702144No Hit
GCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATAT976650.3123932860184837No Hit
GGTGAAATACCACTACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGG925940.29617308069006787No Hit
GTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTT890090.28470602565114644No Hit
GGAAGTGAATCTAGCTCTGAAGGCATGGCGCGTACGAAGCAGACTGCTCG817020.26133370454392213No Hit
GAGTAGGAGGGCCGCTGCGGTGAGCCTTGAAGCCTAGGGCGCGGGCCCGG811200.2594721073242144No Hit
GCGCATGAATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCCAGC740710.23692503034531415No Hit
GCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGC728820.23312187038958815No Hit
GACTGCGATAGGAATCATGTCTGGTCGCGGCAAAGGCGGAAAAGGCTTGG725590.23208871591885688No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT724380.23170168281991418No Hit
GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATC722680.231157917309003No Hit
GGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATA698430.22340126222688736No Hit
GACAAAGCGTTGGGTGAGACTCCTCTTGCTCGTCATGTCTGGCCGCGGCA684450.21892959055480588No Hit
GGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATGAGAGGTGTAGA681640.2180307781514762No Hit
GGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCA657520.21031570513784198No Hit
GGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGAC621510.19879747216848181No Hit
GCTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCAAGTGGAGGAAGAAGCGAATGCGC614170.19644968460960643No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN580630.18572151094139372No Hit
GATTAGATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAACACTACG576980.18455401440326086No Hit
GCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACT574550.1837767495847231No Hit
GGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATC563360.18019749307466643No Hit
GCTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGGTGCG544480.1741584972828997No Hit
GAGTCTTTCTTGACCGTATAGATAATAGGCCTTTTGCCATGTCTGGGCGT539840.17267433730017737No Hit
GAGACGCGGAGCTGGGAAAAGGGAGGCAGAGGAGGCGGAGGCAGAGGCAGAGGCAGAGCCCGGTGCCGAGACCA532130.17020820077716248No Hit
GCTTTTTCGTCTGGGCTGCCAACATGCCATCCAGACTGAGGAAGACCCGG511370.163567864302741No Hit
GAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACA496340.15876033746215554No Hit
GATCGGCGCTTTGCCACTTGTACCCGAGTTTTTGATTCTCAACATGTCCG490260.15681557610548488No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATC473090.1513235444452818No Hit
GAATGAGACAGCATGGCCCGTACTAAGCAGACTGCCCGCAAGTCGACCGG458190.14655759967317775No Hit
GCTTTTCCAAGCGGCTGCCGAAGATGGCGGAGGTGCAGGTCCTGGTGCTT437950.14008359147268207No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACCAGG435240.13921676527587656No Hit
GTGTAAATCTCGCGCCGGGCCGTACCCATATCCGCAGCAGGTCTCCAAGGTGAACAGCCTCTGGCATGTTGGAAC431950.13816441908123075No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC415230.1328163253503865No Hit
GACAGACGTCTCTGCAGGCAAGCTTTTCTGTGGTTTTGCCATGGCTCGTA410230.1312170150241771No Hit
GCCTTTCGTTGCCTGATCGCCGCCATCATGGGTCGCATGCATGCTCCCGG408390.13062846882413204No Hit
GGCCATTTGACCATTCACCACATTGGTGTGCACCTCCAAGCTTTGCAAAGATGGATAAAGTTTTAAACAGAGAGG398260.12738826610323176No Hit
GCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCA394300.12612161232487393No Hit
GCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCC390820.12500849233783218No Hit
GCTCTCCGCCAGACCGCCGCCGCGCCGCCATCATGGACACCAGCCGTGTG369390.11815384827969865No Hit
GACATCTGACCTCATGGAGGCTTGGGAGTGTTTGGAAGATTTTTCTGCTG369040.11804189655686399No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA367280.11747893932203828No Hit
GGATTTTGTTTGTTTTCTCGTGAGCTTAGGCCGCTGGTTTTGGTGATTTT363210.1161771007165038No Hit
GAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATGAACG362240.1158668345132192No Hit
GGTATTGCGTTACAGATTTAACAGCTGTGCTTTCAAGATGTCTGGCCGCGGTAAGGGCGGAAAGGGTCTAGGTA355970.11386129936415261No Hit
GCTCTTCCCTTTTGCGGCCATCACCGAAGCGGGAGCGGCCAAAATGAAGTTTAATCCCTTTGTGACTTCCGACCG355180.11360860833261151No Hit
GCTTTTCGAGGTAGGAGTCGACTCCTGTGAGGTATGGTGCTGGGTGCAGA354430.1133687117836801No Hit
GCTTTCCAACTTGGACGCTGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATC351920.11256585799992297No Hit
GCCTTTTTGCTGTAGGCCCGGGTGGTTGCTGCCGAAATGGGCAAGTTCAT347800.11124802629112643No Hit
GCTACGCCGCGACGAGTAGGAGGGCCGCTGCGGTGAGCCTTGAAGCCTAG347730.11122563594655949No Hit
GCTTTCTCTCTCGCGCGCGGTGTGGTGGCAGCAGGCGCAGCCCAGCCTCG343690.1099333932029823No Hit
GCTCTACCGGCGGGATTTGATGGCGTGATGTCTCACAGAAAGTTCTCCGC343590.10990140699645809No Hit
GGTGGTTGCTCGTAGTGAGTTGCGCTCGCTATGTCTGGACGTGGCAAGCAGGGAGGCAAAGCCCGCGCTAAGGCC341300.1091689228670542No Hit
GCCTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGAAGCTAAG338480.10826691184307208No Hit
GTTCAAGCTCAACACCCACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTGGACCAATCT335190.10721456564842631No Hit
GGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGCGCTCTCGC328500.10507468843195811No Hit
GCTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG326360.10439018361234048No Hit
GCTCTTTTACCAAGGACCCGCCAACATGGGCCGCGTTCGCACCAAAACCGTGAAGAAGGCGGCCCGGGTCATCAT323020.1033218443144326No Hit

[OK]Adapter Content

Adapter graph