Personal tools

TSS:Hg 102033.1

From referenceTSS

Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_102033.1
Species:human
Chr:chr9
TSS Classification:no
Start:111783488
End:111783512
Strand:-
TSS Score:1
Start of the center position in the TSS region:111783500
End of the center position in the TSS region:111783501



Gene and protein annotation


Transcript_name:ENST00000318737.8 AL833535
Distance:0
GeneID:158401
HGNC/MGI_ID:HGNC:26535
UniProt_ID:Q5VXU9
Gene_name:shortage in chiasmata 1
Gene_symbol:SHOC1
Gene_synonyms:FLJ32779 MZIP2 Zip2
Gene_source:HGNC:26535



Transcript annotation


Transcript_name:ENST00000318737.8 AL833535
Distance:0
Num_trans:158401
All_trans:HGNC:26535



TATA-Box annotation


Distance to TSS:-7
Nearest PromoterID:NM_173521
Entrez ID:158401
Nearest Unigene:Hs.428209
Nearest Refseq:NM_173521
Nearest Ensembl:ENSG00000165181
Gene Name:shortage in chiasmata 1
Gene Alias:C9orf84|ZIP2|ZIP2H
Gene Description:shortage in chiasmata 1
Gene Type:protein-coding
CpG%:0.005
GC%:0.393035
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):