Basic information about the TSS
| TSS ID: | hg_243491.1 |
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| Species: | human |
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| Chr: | chrM |
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| TSS Classification: | yes |
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| Start: | 1998 |
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| End: | 2000 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 1999 |
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| End of the center position in the TSS region: | 2000 |
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Gene and protein annotation
| Transcript_name: | Y17174 |
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| Distance: | -9 |
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| GeneID: | 2889 |
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| HGNC/MGI_ID: | HGNC:4568 |
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| UniProt_ID: | B4DZ62 |
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| Gene_name: | PRRT1B |
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| Gene_symbol: | RAPGEF1 |
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| Gene_synonyms: | C3G |
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| Gene_source: | HGNC:4568 |
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Transcript annotation
| Transcript_name: | Y17174 |
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| Distance: | -9 |
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| Num_trans: | 31 |
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| All_trans: | Y17174:-9 BC006998:-35 AF054990:-93 BC018865:93 AK126611:-104 Y17170:-157 AB019564:-217 BC035832:-245 DQ593671:247 BC035825:-292 BC008007:-300 AB462504:-303 AK026170:306 BC018940:-308 BC000845:-311 U25123:-315 AY029066:-316 X51525:-327 LF641695:-328 LF641696:-328 LF641697:-328 LQ059297:-328 LQ059298:-328 LQ059299:-328 MA264841:-328 MA264842:-328 MA264843:-328 MS942517:-328 MS942518:-328 MS942519:-328 AK026634:-329 |
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TATA-Box annotation
| Distance to TSS: | 80791 |
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| Nearest PromoterID: | NM_001365666 |
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| Entrez ID: | 642515 |
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| Nearest Unigene: | |
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| Nearest Refseq: | NM_001365666 |
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| Nearest Ensembl: | ENSG00000283526 |
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| Gene Name: | PRRT1B |
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| Gene Alias: | DSPD2|IFITMD8 |
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| Gene Description: | proline rich transmembrane protein 1B |
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| Gene Type: | protein-coding |
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| CpG%: | 0.035 |
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| GC%: | 0.597015 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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