Personal tools

TSS:Mm 3563.1

From referenceTSS

Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_3563.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:150430627
End:150430641
Strand:+
TSS Score:1
Start of the center position in the TSS region:150430634
End of the center position in the TSS region:150430635



Gene and protein annotation


Transcript_name:ENSMUST00000150752.8 BC026677
Distance:-204
GeneID:108989
HGNC/MGI_ID:MGI:1922066
UniProt_ID:
Gene_name:translocated promoter region, nuclear basket protein
Gene_symbol:Tpr
Gene_synonyms:2610029M07Rik
Gene_source:MGI:1922066



Transcript annotation


Transcript_name:ENSMUST00000150752.8 BC026677
Distance:-204
Num_trans:108989
All_trans:MGI:1922066



TATA-Box annotation


Distance to TSS:35531
Nearest PromoterID:NM_001110146
Entrez ID:96875
Nearest Unigene:Mm.174256
Nearest Refseq:NM_021400
Nearest Ensembl:ENSMUSG00000006014
Gene Name:translocated promoter region, nuclear basket protein
Gene Alias:CACP|DOL54|JCAP|MSF|SZP|lubricin
Gene Description:proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
Gene Type:protein-coding
CpG%:0.005
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):