Basic information about the TSS
| TSS ID: | mm_3567.1 |
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| Species: | mouse |
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| Chr: | chr1 |
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| TSS Classification: | no |
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| Start: | 150439077 |
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| End: | 150439104 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 150439090 |
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| End of the center position in the TSS region: | 150439091 |
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Gene and protein annotation
| Transcript_name: | LF218535 MA454112 |
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| Distance: | 62 |
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| GeneID: | 108989 |
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| HGNC/MGI_ID: | MGI:1922066 |
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| UniProt_ID: | Q8BIX0 |
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| Gene_name: | Prg4 |
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| Gene_symbol: | Tpr |
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| Gene_synonyms: | 2610029M07Rik |
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| Gene_source: | MGI:1922066 |
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Transcript annotation
| Transcript_name: | LF218535 MA454112 |
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| Distance: | 62 |
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| Num_trans: | 6 |
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| All_trans: | LF218535:62 MA454112:62 LF218536:122 MA454113:122 ENSMUST00000152967.7:-146 AK077396:-146 |
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TATA-Box annotation
| Distance to TSS: | 27074 |
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| Nearest PromoterID: | NM_001110146 |
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| Entrez ID: | 96875 |
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| Nearest Unigene: | Mm.174256 |
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| Nearest Refseq: | NM_021400 |
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| Nearest Ensembl: | ENSMUSG00000006014 |
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| Gene Name: | Prg4 |
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| Gene Alias: | CACP|DOL54|JCAP|MSF|SZP|lubricin |
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| Gene Description: | proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) |
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| Gene Type: | protein-coding |
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| CpG%: | 0.005 |
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| GC%: | 0.328358 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -20(AACTCTTAAAGG,-,0.00) |
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