Personal tools

TSS:Mm 50371.1

From referenceTSS

Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_50371.1
Species:mouse
Chr:chr6
TSS Classification:no
Start:48676408
End:48676422
Strand:+
TSS Score:1
Start of the center position in the TSS region:48676415
End of the center position in the TSS region:48676416



Gene and protein annotation


Transcript_name:LF283581 MA519158
Distance:-41
GeneID:317758
HGNC/MGI_ID:MGI:3511744
UniProt_ID:Q8CGH1
Gene_name:Gimap9
Gene_symbol:Gimap9
Gene_synonyms:
Gene_source:MGI:3511744



Transcript annotation


Transcript_name:LF283581 MA519158
Distance:-41
Num_trans:11
All_trans:LF283581:-41 MA519158:-41 BC038043:-185 LF283580:-208 MA519157:-208 BC096680:-250 AK041336:-262 NM_174960:-274 ENSMUST00000054050.4:-280 LF195478:-281 MA431055:-281



TATA-Box annotation


Distance to TSS:280
Nearest PromoterID:NM_174960
Entrez ID:317758
Nearest Unigene:Mm.116971
Nearest Refseq:NM_174960
Nearest Ensembl:ENSMUSG00000051124
Gene Name:Gimap9
Gene Alias:A630002K24|BB145400|IAN-7
Gene Description:GTPase, IMAP family member 9
Gene Type:protein-coding
CpG%:0.01
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):33(CCCTTTATAGAA,+,0.00)