Personal tools

TSS:Mm 95726.1

From referenceTSS

Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_95726.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:54596129
End:54596155
Strand:+
TSS Score:1
Start of the center position in the TSS region:54596142
End of the center position in the TSS region:54596143



Gene and protein annotation


Transcript_name:ENSMUST00000149372.1 AK049669 AK038235
Distance:0
GeneID:192786
HGNC/MGI_ID:MGI:2384761
UniProt_ID:Q3TPI6 Q8BLC8
Gene_name:Rap guanine nucleotide exchange factor (GEF) 6
Gene_symbol:Rapgef6
Gene_synonyms:C030018K18Rik PDZ-GEF2 Pdzgef2 RA-GEF-2
Gene_source:MGI:2384761



Transcript annotation


Transcript_name:ENSMUST00000149372.1 AK049669 AK038235
Distance:0
Num_trans:192786
All_trans:MGI:2384761



TATA-Box annotation


Distance to TSS:-4
Nearest PromoterID:NM_001252497
Entrez ID:192786
Nearest Unigene:Mm.254404
Nearest Refseq:NM_175258
Nearest Ensembl:ENSMUSG00000037533
Gene Name:Rap guanine nucleotide exchange factor (GEF) 6
Gene Alias:A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052
Gene Description:Rap guanine nucleotide exchange factor (GEF) 6
Gene Type:protein-coding
CpG%:0.005
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):