rfhg_10008.1

From referenceTSS
Revision as of 18:17, 22 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000342173.11) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D2204050,EH38E1372062) |chr=chr1 |cpg_percent=0.078125 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_10008.1
Species:human
Chr:chr1
Start:101025850
End:101025915
Strand:+
Source datasets
Protocol
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2204050,EH38E1372062)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BX538249:0
GeneID:102606465
HGNC/MGI_ID:HGNC:53720
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:DPH5 divergent transcript
    Gene_symbol:DPH5-DT
    Gene_synonyms:
    Gene_source:HGNC:53720



    TATA-Box annotation


    Distance to TSS:5
    Nearest PromoterID:ENST00000453011.5
    Entrez ID:ENSG00000233184
    Nearest Unigene:ENST00000453011
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:DPH5 divergent transcript
    Gene Alias:
    Gene Type:antisense
    CpG%:0.078125
    GC%:0.723077
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.