rfhg_15914.1

From referenceTSS
Revision as of 15:43, 23 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000236192.11) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D2239680,EH38E1397276) |chr=chr1 |cpg_percent=0.062500 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_15914.1
Species:human
Chr:chr1
Start:171742178
End:171742195
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2239680,EH38E1397276)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK092254:-38
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:60
    Nearest PromoterID:ENST00000236192.11
    Entrez ID:ENSG00000117533
    Nearest Unigene:ENST00000474047
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.062500
    GC%:0.470588
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):