rfhg_187220.1

From referenceTSS
Revision as of 01:40, 24 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=intron (ENST00000602425.2, intron 6 of 7) |ccre_category=pELS |ccre_description=pELS (EH38D2893990,EH38E1835162) |chr=chr16 |cpg_percent=0.052632 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_187220.1
Species:human
Chr:chr16
Start:86223061
End:86223081
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2893990,EH38E1835162)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000667546.1:0
GeneID:
HGNC/MGI_ID:HGNC:49124
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:long intergenic non-protein coding RNA 1081
    Gene_symbol:LINC01081
    Gene_synonyms:TCONS_00024764
    Gene_source:HGNC:49124



    TATA-Box annotation


    Distance to TSS:-24158
    Nearest PromoterID:ENST00000599841.1
    Entrez ID:ENSG00000268505
    Nearest Unigene:ENST00000599841
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:long intergenic non-protein coding RNA 1081
    Gene Alias:
    Gene Type:lincRNA
    CpG%:0.052632
    GC%:0.600000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.