rfhg_125178.1

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Basic information about the TSS


TSS ID:rfhg_125178.1
Species:human
Chr:chr10
Start:47384272
End:47384331
Strand:-
Source datasetsPRJNA548673
ProtocolCAGE|ReCappable-seq
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2340573,EH38E1465935)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000585316.3:0
BC051323:0
AK056666:0
GeneID:118738
HGNC/MGI_ID:HGNC:23535
UniProt_ID:Q96MN9
Nearer transcript ids and distances:
    Gene_name:ZNF488
    Gene_symbol:ZNF488
    Gene_synonyms:FLJ32104
    Gene_source:HGNC:23535



    TATA-Box annotation


    Distance to TSS:-8
    Nearest PromoterID:NM_001346933
    Entrez ID:118738
    Nearest Unigene:Hs.27788
    Nearest Refseq:NM_153034
    Nearest Ensembl:ENSG00000265763
    Gene Name:ZNF488
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.101695
    GC%:0.733333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.