rfhg_23704.1
From referenceTSS
Basic information about the TSS
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| Source datasets | PRJNA4843412 | |||||||||||||
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| Protocol | NETCAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3095857,EH38E1978377) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -48 |
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| Nearest PromoterID: | NM_002997 |
| Entrez ID: | 6382 |
| Nearest Unigene: | Hs.224607 |
| Nearest Refseq: | NM_002997 |
| Nearest Ensembl: | ENSG00000115884 |
| Gene Name: | SDC1 |
| Gene Alias: | CD138|SDC|SYND1|syndecan |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |