rfmm_100495.1

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Basic information about the TSS


TSS ID:rfmm_100495.1
Species:mouse
Chr:chr10
Start:120734895
End:120734916
Strand:-
Source datasetsFANTOM5|DRA000914
ProtocolCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2344750,EM10E0965736)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_177092.4:19
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:Msrb3
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:11
    Nearest PromoterID:XM_006513766.4
    Entrez ID:Msrb3
    Nearest Unigene:XM_006513766
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Msrb3
    Gene Alias:
    Gene Type:
    CpG%:0.047619
    GC%:0.545455
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):