rfhg_177337.1

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Basic information about the TSS


TSS ID:rfhg_177337.1
Species:human
Chr:chr15
Start:82540000
End:82540043
Strand:-
Source datasetsPRJNA401781|PRJNA615891|PRJNA4843412|DRA013844
ProtocolCAGE|SLIC_CAGE|NETCAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2817432,EH38E1782982)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000561440.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RPS17
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:436
    Nearest PromoterID:NR_111944
    Entrez ID:6218
    Nearest Unigene:Hs.433427
    Nearest Refseq:NM_001021
    Nearest Ensembl:ENSG00000182774
    Gene Name:RPS17
    Gene Alias:DBA4|RPS17L|RPS17L1|RPS17L2|S17
    Gene Type:protein-coding
    CpG%:0.093023
    GC%:0.568182
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):