rfhg_86736.1

Basic information about the TSS

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TSS ID: rfhg_86736.1 TSS ID(Version3): hg_75362.1 hg_75363.1 Species: human Chr: chr6		Start: 122471751 End: 122471853 Strand: -
Source datasets	FANTOM5|PRJNA548673|PRJDB5282|PRJNA4843412|DRA013844 |PRJNA401781|PRJNA615891|PRJNA597322
Protocol	CAGE|ReCappable-seq|C1CAGE|NETCAGE|RAMPAGE|SLIC_CAGE |TIF-seq2|STRIPE-seq|oligo_capping
TSS cluster detected*	12

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3894181,EH38E2499144)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000339697.5:0 BC033029:0 AL137261:0 BC028607:0 AY358429:0 AB033079:0 AK075339:0 AF164794:0 BC014412:0 GeneID: 57515 HGNC/MGI_ID: HGNC:13464 UniProt_ID: Q9NRX5 Nearer transcript ids and distances:

Gene_name: SERINC1 Gene_symbol: SERINC1 Gene_synonyms: KIAA1253 TDE1L TMS-2 Gene_source: HGNC:13464

TATA-Box annotation

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Distance to TSS:	5
Nearest PromoterID:	NM_020755
Entrez ID:	57515
Nearest Unigene:	Hs.146668
Nearest Refseq:	NM_020755
Nearest Ensembl:	ENSG00000111897
Gene Name:	SERINC1
Gene Alias:	TDE1L|TDE2|TMS-2|TMS2
Gene Type:	protein-coding
CpG%:	0.078431
GC%:	0.533981
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.