rfmm_104220.1

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Basic information about the TSS


TSS ID:rfmm_104220.1
Species:mouse
Chr:chr11
Start:50268838
End:50268873
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2360355,EM10E0972181)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001362529.1:190
NM_001362526.1:190
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:Hnrnph1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-208
    Nearest PromoterID:NM_001362526.1
    Entrez ID:Hnrnph1
    Nearest Unigene:XM_036156877
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Hnrnph1
    Gene Alias:
    Gene Type:
    CpG%:0.171429
    GC%:0.722222
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):